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Publication

홈으로 이동 Publication

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[2023]


Junesung Lee, Hagki Jang, Won-Hee Kang, Seon-In Yeom. (2023). Transcriptome Analysis of Pepper-Phytophthora infestans Interaction Based on a Pipeline of a Simplified and Effective RNA-seq Analysis (PoRAS). Horticultural Science and Technology, 41(1), 100-110. doi:10.7235/HORT.20230010

Kim, N., Kwon, J. S., Kang, W. H., & Yeom, S. I. (2023). High-Resolution Melting (HRM) Genotyping. In Plant Genotyping: Methods and Protocols (pp. 337-349). New York, NY: Springer US.

[2022]


Kang, W. H., Lee, J., Koo, N., Kwon, J. S., Park, B., Kim, Y. M., & Yeom, S. I. (2022). Universal gene co-expression network reveals receptor-like protein genes involved in broad-spectrum resistance in pepper (Capsicum annuum L.). Horticulture Research9.


Kang, W. H., Nam, J. Y., Kwon, J. S., & Yeom, S. I. (2022). Differential Responses of Capsicum Accessions to Foliar Blight and Root Rot by Phytophthora capsici. Horticultural Science and Technology40(1), 85-93.


[2021]


Kang, W. H., Park, B., Lee, J., & Yeom, S. I. (2021). Tissue-Specific RNA-Seq Analysis and Identification of Receptor-Like Proteins Related to Plant Growth in Capsicum annuum. Plants, 10(5), 972.

 

Kwon, J. S., Nam, J. Y., Yeom, S. I., & Kang, W. H. (2021). Leaf-to-whole plant spread bioassay for pepper and Ralstonia solanacearum interaction determines inheritance of resistance to bacterial wilt for further breeding. International journal of molecular sciences, 22(5), 2279.

 

Kang, W. H., Lee, J., Koo, N., Kwon, J. S., Park, B., Kim, Y. M., & Yeom, S. I. (2021). Universal gene co-expression network reveals receptor-like protein genes conferring broad-spectrum resistance in pepper (Capsicum annuum L.). bioRxiv.



[2020] 


Lee, J., Nam, J. Y., Jang, H., Kim, N., Kim, Y. M., Kang, W. H., & Yeom, S. I. (2020). Comprehensive transcriptome resource for response to phytohormone-induced signaling in Capsicum annuum L. BMC Research Notes, 13(1), 1-4.

 

Chung, J. S., Koo, S. C., Jin, B. J., Baek, D., Yeom, S. I., Chun, H. J., ... & Kim, M. C. (2020). Rice CaM-binding transcription factor (OsCBT) mediates defense signaling via transcriptional reprogramming. Plant Biotechnology Reports, 14(3), 309-321.

 

Kang, W. H., Sim, Y. M., Koo, N., Nam, J. Y., Lee, J., Kim, N., ... & ,Yeom, S. I. (2020). Transcriptome profiling of abiotic responses to heat, cold, salt, and osmotic stress of Capsicum annuum L. Scientific Data, 7(1), 1-7.



[2019]


Kim, D. H., Kang, W. H., Yeom, S. I., & Kim, B. D. (2019). Isolation of putative pepper defense-related genes against the pathogen Phytophthora capsici using suppression subtractive hybridization/macroarray and RNA-sequencing analyses. Horticulture, Environment, and Biotechnology, 1-15.

 

Kim, N., Kang, W. H., Lee, J., & Yeom, S. I. (2019). Development of clustered resistance gene analogs-based markers of resistance to Phytophthora capsici in chili pepper. BioMed research international, 2019.



[2018] 


Harun-Or-Rashid, M., Kim, H. J., Yeom, S. I., Yu, H. A., Manir, M. M., Moon, S. S., ... & Chung, Y. R. (2018). Bacillus velezensis YC7010 enhances plant defenses against brown planthopper through transcriptomic and metabolic changes in rice. Frontiers in plant science, 9.

 

Seo, E., Kim, T., Park, J. H., Yeom, S. I., Kim, S., Seo, M. K., ... & Choi, D. (2018). Genome-wide comparative analysis in Solanaceous species reveals evolution of microRNAs targeting defense genes in Capsicum spp. DNA Research, 25(6), 561-575.

 

Kang, W. H., & Yeom, S. I. (2018). Genome-wide Identification, Classification, and Expression Analysis of the Receptor-Like Protein Family in Tomato. The plant pathology journal, 34(5), 435.

 

Kang, H. S., Kim, S. H., Lee, S. W., Kim, S. W., Ryu, J., Kim, J. B., Yeom, S. I., ... & Jo, Y. D. (2018). Optimization of TILLING system based on capillary electrophoresis for targeted selection of pepper gene mutants. Horticulture, Environment, and Biotechnology, 59(3), 447-460.

 

Kim, M. S., Kim, S., Jeon, J., Kim, K. T., Lee, H. A., Lee, H. Y., Park, J. E., Seo, E. Y., Kim, S. B., Yeom, S. I., Choi, D. I., & Lee, Y. H. (2018). Global gene expression profiling for fruit organs and pathogen infections in the pepper, Capsicum annuum L. Scientific data, 5.

 

Kang, W., Lee, J., Nam, J., & Yeom, S. (2018). Identification of CaLOP regulating development and growth through virus-induced gene silencing in pepper. Horticultural Science and Technology, 36(2), 292-301.



[2017] 


Kim, S., Park, J., Yeom, S. I., Kim, Y. M., Seo, E., Kim, K. T., ... & Kim, S. B. (2017). New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication. Genome biology, 18(1), 210.


Kim, Y. M., Kim, S., Koo, N., Shin, A. Y., Yeom, S. I., Seo, E., ... & Kim, R. W. (2017). Genome analysis of Hibiscus syriacus provides insights of polyploidization and indeterminate flowering in woody plants. Dna Research, 24(1), 71-80.

 

Kim, S. B., Kang, W. H., Huy, H. N., Yeom, S. I., An, J. T., Kim, S., ... & Choi, D. (2017). Divergent evolution of multiple virus resistance genes from a progenitor in Capsicum spp. New Phytologist, 213(2), 886-899.



[2016] 


Kang, W. H., Kim, S., Lee, H. A., Choi, D., & Yeom, S. I. (2016). Genome-wide analysis of Dof transcription factors reveals functional characteristics during development and response to biotic stresses in pepper. Scientific reports, 6, 33332. 

 

Seo, E., Kim, S., Yeom, S. I., & Choi, D. (2016). Genome-wide comparative analyses reveal the dynamic evolution of nucleotide-binding leucine-rich repeat gene family among Solanaceae plants. Frontiers in plant science, 7, 1205.

 


[2015]


Lee, H. A., & Yeom, S. I. (2015). Plant NB-LRR proteins: tightly regulated sensors in a complex manner. Briefings in functional genomics, 14(4), 233-242.



[2014] 


Kim, S., Kim, M. S., Kim, Y. M., Yeom, S. I., Cheong, K., Kim, K. T., ... & Lee, Y. H. (2014). Integrative structural annotation of de novo RNA-Seq provides an accurate reference gene set of the enormous genome of the onion (Allium cepa L.). DNA Research, 22(1), 19-27.

 

Lee, H. A., Kim, S. Y., Oh, S. K., Yeom, S. I., Kim, S. B., Kim, M. S., ... & Choi, D. (2014). Multiple recognition of RXLR effectors is associated with nonhost resistance of pepper against Phytophthora infestans. New phytologist, 203(3), 926-938.

 

Kim, S., Park, M., Yeom, S. I., Kim, Y. M., Lee, J. M., Lee, H. A., ... & Choi, D. (2014). Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species. Nature genetics, 46(3), 270-278.



[2013] 


Hwang, D. G., Park, J. H., Lim, J. Y., Kim, D., Choi, Y., Kim, S., Reeves, G., Yeom, S. I., ... & Kim, S. (2013). The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding microRNA functional roles in hot pepper. PloS one, 8(5), e64238.



[2012] 


Strauß, T., van Poecke, R. M., Strauß, A., Romer, P., Minsavage, G. V., Singh, S., ... & Yeom, S. I. (2012). RNA-seq pinpoints a Xanthomonas TAL-effector activated resistance gene in a large-crop genome. Proceedings of the National Academy of Sciences, 109(47), 19480-19485.

 

Tomato Genome Consortium. (2012). The tomato genome sequence provides insights into fleshy fruit evolution. Nature, 485(7400), 635-641.

 

Seo, E.Yeom, S. I., Jo, S., Jeong, H., Kang, B. C., & Choi, D. (2012). Ectopic expression of Capsicum-specific cell wall protein Capsicum annuum senescence-delaying 1 (CaSD1) delays senescence and induces trichome formation in Nicotiana benthamiana. Molecules and cells, 33(4), 415-422.

 

Yeom, S. I., Seo, E., Oh, S. K., Kim, K. W., & Choi, D. (2012). A common plant cell wall protein HyPRP1 has dual roles as a positive regulator of cell death and a negative regulator of basal defense against pathogens. The Plant Journal, 69(5), 755-768.



[2011] 


Lee, H. R., Kim, K. T., Kim, H. J., Han, J. H., Kim, J. H., Yeom, S. I., ... & Lee, S. (2011). QTL analysis of fruit length using rRAMP, WRKY, and AFLP markers in chili pepper. Horticulture, Environment, and Biotechnology, 52(6), 602-613. 

 

Shi, J.Yeom, S. I., Kang, W. H., Park, M. K., Choi, D., Kwon, J. K., ... & Kang, B. C. (2011). Isolation of an Rx homolog from C. annuum and the evolution of Rx genes in the Solanaceae family. Plant biotechnology reports, 5(4), 331-344.

 

Yeom, S. I., Baek, H. K., Oh, S. K., Kang, W. H., Lee, S. J., Lee, J. M., ... & Choi, D. (2011). Use of a secretion trap screen in pepper following Phytophthora capsici infection reveals novel functions of secreted plant proteins in modulating cell death. Molecular plant-microbe interactions, 24(6), 671-684. 



[2010] 


Oh, S. K., Kim, S. B., Yeom, S. I., Lee, H. A., & Choi, D. (2010). Positive-selection and ligation-independent cloning vectors for large scale in planta expression for plant functional genomics. Molecules and cells, 30(6), 557-562.

 

Yi, S. Y., Lee, D. J., Yeom, S. I., Yoon, J., Kim, Y. H., Kwon, S. Y., & Choi, D. (2010). A novel pepper (Capsicum annuum) receptor like kinase functions as a negative regulator of plant cell death via accumulation of superoxide anions. New phytologist, 185(3), 701-715.



[2008] 


Kim, H. J., Lee, H. R., Han, J. H., Yeom, S. I., Harn, C. H., & Kim, B. D. (2008). Marker production by PCR amplification with primer pairs from conserved sequences of WRKY genes in chili pepper. Molecules & Cells (Springer Science & Business Media BV), 25(2), 196-204.

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최근 업데이트 일시 : 2023/05/12 09:41:47